Showing posts with label fern. Show all posts
Showing posts with label fern. Show all posts

Saturday, November 16, 2024

The largest known genome belong to a tiny fern.

Usually plants have small genomes sequences, but some of them are exceptional diverse and can posses very large genomes. Those genomes were discovered to be the biggest yet in the plant and in the eukaryotic world. The record goes to a tiny but mighty little fern that has a genome 50 times bigger than the size of the human genome. The little fork fern discovered in New Caledonia (Tmesipteris oblanceolata) have a genome that measure 160.45 Gbp/1C. This record was before held from another plant, an angiosperm called Japanese flower or Paris japonica with the whopping 148.89 Gbp/1C. The discovery of the genome of this new fern was suggested by previous works on fork fern (T.mesipteris) that had already a big genome. A team led by Jaume Pellicer, an evolutionary biologist from the Botanical Institute of Barcelona started to study more accurately the six fork fern species found in the South Pacific Island of New Caledonia. The researches collected cells from the fern’s leaves and isolated the nuclei of the cells. The nuclei were then stained with a fluorescent dye to highlight the DNA and the fluorescent glow was compared to other plants with smaller genome to calculate the size of the genome. 

It is extremely fascinating to me how a fern T. Oblanceolata that survives in the large forest and it grows only up to 15cm in length can hide a genome of a length of 160 billion nucleobases. Moreover, it takes great deal of energy for an organism to replicate almost 100 meter of DNA every time a cell replicates. It is still very puzzling how a plant like a fern can hold such an extreme size genome and make it functional. Plants have an history of inherit extra copies of entire chromosomes or to accumulate long sections of repetitive DNA sequences. This could probably explain how ferns end it up with such a large genome. Another assumption made from plant evolutionist  Liming Cai suggests that fork fern might had a repeated history of genetic bottleneck. This happens when some species undergo multiple replication and with time loose some of the genetic diversity. This is also connected to deleterious mutations that tends to accumulate and “junk” DNA could play a role in creating the large genomes. I think even though now genome as large as the one of the fern can be traced and sequenced it is important to be studied to preserve biodiversity. Through different variety of genomes we can learn way more about how the human one works by comparing and contrasting how different species had survived through centuries of evolution. 




Saturday, December 6, 2014

Plants That Practice Genetic Engineering

Ferns

People often avoid purchasing plants that were genetically modified. However, plants were found to modify their own genes from one species to another. These plants are found to "learn" specific features that help them thrive through other plants. For example, ferns were found to acquire a specific gene that allowed them to sense light like a hornwort would. Research done by Kathleen M. Pryer and other scientists studied DNA from a vast number of fern species to further investigate this phenomenon. These ferns were found to have acquired a light sensing protein along with the gene called neochromes. Pryer's mission was aimed towards finding where the neochrome oringinated. Pryer's colleagues have found that because the hornwort and fern had grown in close contact, the fern was able to pick up the neochrome gene and pass it on to other ferns.  

If this process of genetically engineering plants could be isolated, many species may have longer lifespans or ability to survive in many conditions. Gardeners would be able to grow plants that are not native to their area, and be able to thrive in those conditions. This phenomenon has solely been found between ferns and hornworts but scientists suggest that there is bound to be many more cases. 

Primary Source: http://www.nytimes.com/2014/04/17/science/plants-that-practice-genetic-engineering.html

Secondary Source: http://agbiosafety.unl.edu/education/summary.htm