Showing posts with label CHOP. Show all posts
Showing posts with label CHOP. Show all posts

Wednesday, July 3, 2019

Discovery of Mutated Gene Leads to Cure for Lymphatic Disorder

Daniel was only 10 years old when he was first rushed to the hospital for shortness of breath, swelling in his abdomen and exercise intolerance. “This came on suddenly” said his mother. The doctors at the Virginia hospital ended up having to drain lymphatic fluid around Daniel’s heart. After, he was transferred to Children’s Hospital of Philadelphia (CHOP) for further evaluation and care by the lymphatics team. The lymphatics team at CHOP treated Daniel with minimally invasive strategies and surgical interventions, but the fluid persistently returned. Over a two year period, Daniel’s condition worsened.

Hakonarson, a pediatric pulmonologist at CHOP, consulted with the lymphatics team. His genomics team then performed whole-exome sequencing (WES) on Daniel’s DNA. The purpose of whole-exome sequencing is to find a genetic cause of a patient’s signs and symptoms. This form of genetic testing only considers the portion of DNA that is used to create proteins. 

 Courtesy of EpilepsyU
The sequencing revealed a mutation in Daniel’s ARAF gene. Researchers studied the function of the ARAF mutation by inserting it into the embryos of zebrafish. Subsequently, the zebrafish developed abnormal lymphatic channels. The next step was to try using an MEK inhibitor, known to effect biological pathways affected by the ARAF gene. MEK inhibitors are commonly used to treat melanoma and some tumors. 
Credit:  Mirko Rosenau/shutterstock.com

Based on Harkonson’s research with the zebrafish, he was able to collaborate with other doctors at CHOP and gain permission from the FDA to use an MEK inhibitor, trametinib, on Daniel. A couple of months into the experimental treatment, Daniel’s breathing improved. A month after that improvement, Daniel had a reduced amount of fluid retention and was able to start breathing on his own. The doctors used an MRI to confirm his lymphatic vessels were being remodeled.

Daniel, now 14 years old, has resumed numerous of his favorite physical activities. Harkonson and Dori say this experimental technique is “the first real evidence for complete remodeling of an entire organ system by a drug.” Based on Harkonsons work, not just with Daniel’s case, has allowed CHOP to expand an existing program that allows research for possible involvement in genetic mutations.


My reaction to this article is both excited and interested. I am excited for Daniel and the results of Harkonson’s research. I am interested to see what research and studies come from a successful experience like this one. It is amazing how much doctors and researchers can learn by studying our DNA. Read the full article at ScienceDaily.

Sunday, April 21, 2019

CRISPR Treats Lung Disease Before Birth

An article is ScienceDaily explains how using CRISPR gene editing can be a new approach for treating a lethal lung disease before birth. A research team from the Children's Hospital of Philadelphia (CHOP) and Penn Medicine used CRISPR on an animal model that had a lethal lung disease. Some lethal lung diseases that the research team is trying to fix before birth are respiratory disorders and congenital causes of respiratory diseases. If a child was to be born with one of these lung diseases, there is a very high chance of death, and that is why research teams are trying fix the lung disease before the baby is born. CRISPR is used to edit gene cells that are lining the airways of the lungs. The researchers identified alveolar epithelial progenitor (AEP) lineage which are cells that keep the lungs from collapsing while breathing. These cells are very stable and replicate quickly to regenerate the lining.

https://www.sciencedaily.com/releases/2019/04/190417171025.htm
I found this article to be very interesting because there are researchers that are trying to figure out new ways to decrease deaths in newborn babies with lung disease. It is also very interesting that they use gene editing to make new cells that can help make a more stable lung for a baby. Lastly, they are doing this gene editing while the baby is in the third trimester which is amazing.

Monday, May 2, 2016

CHOP joins 'largest ever' autism genetics study

The Children's Hospital of Philadelphia, along with 21 other research sites, have joined the "largest ever" autism genetics study. Information for DNA analysis will be collected from 50,000 individuals and their families and will be studied. This information will be used to help researchers study the causes of autism, and will help find ways to treat it. Since autism is caused by many gene variants, and has countless symptoms, it is very hard to study and treat.

Hopefully with the use of this very large sample size, it will help find new discoveries on the many causes of autism and how to treat it. This has the potential to completely change the way we study and deal with autism and may one day lead to a cure.

http://www.bizjournals.com/philadelphia/morning_roundup/2016/04/chop-joins-largest-ever-autism-genetics-study.html

http://www.hsxsepa.org/sites/default/files/library/chop-kop-exterior-dusk.jpg